我们所展示的质粒图谱主要是从文献和开放数据库中收集而来,主要是为了方便研究工作,其中一小部分质粒进行了质量控制,可供科学家使用。
所有的产品都严格仅供学术研究使用,不能应用于临床试验,包括人体摄入、注射或外用的药理学用途。
确保质粒的关键元件正确,但是我们并不能保证实验结果。页面展示的图谱序列为理论序列,可能与测序结果不一致,请自行比对后确定是否满足要求。(如果测过序,本页面一般会提供下载)
开放数据库中的大多数载体序列都没有被完全测序。如果实际序列与参考序列的相似度超过99%,则将其视为正确。
由于科学研究是在探索未知,具有很大的不确定性,在任何情况下,我们都不承担超出质粒本身的额外经济损失或责任。
Note:
- 载体名称:
- Alpha-3000-gli3Act
- 载体抗性:
- Ampicillin
- 载体长度:
- 10139 bp
- 载体类型:
- Cloning vector
- 复制子:
- ori
- 载体来源:
- Vega Lopez GA, Cerrizuela S, Palacio MB, Aguero TH, Tribulo C, Aybar MJ.
Alpha-3000-gli3Act 载体图谱
质粒操作方法
1. 发货形式:质粒干粉(常温运输,存于-20度,请务必先转化提质粒后使用)
2. 收到质粒干粉后请先5000rpm离心1min,再加入20μl ddH2O溶解质粒;(质粒复测的浓度有时候与标称值差距较大,这可能是因为冻干质粒在管中的位置、复溶效率、测量偏差以及管壁的吸附导致,因此建议先转化提质粒后再使用)
3. 取1支100μl 感受态于冰上解冻10min,加入2μl质粒,再冰浴30min后,42℃热激60s,不要搅动,再冰浴2min;
4. 加入900μl无抗的LB液体培养基,180rpm震荡37℃培养45min (30℃培养1-1.5小时);
5. 6000rpm离心5min,仅留100μl上清液重悬细菌沉淀,并涂布至目标质粒抗性的LB平板上;
6. 将平板倒置37℃培养14h,如果要求是30℃则培养20h; (菌落过多则将质粒稀释后再转化;没有菌落则加入10μl质粒转化;建议不要直接转表达感受态, 要先转克隆感受态,重提质粒后再导入表达感受态);
7. 挑取单菌落至LB液体培养基中,加入对应抗生素,220rpm震荡培养14h,根据实验需要和质粒提取试剂盒说明书提取质粒。
Alpha-3000-gli3Act 载体序列
LOCUS 40924_235 10139 bp DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector Alpha-3000-gli3Act, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 10139)
AUTHORS Vega Lopez GA, Cerrizuela S, Palacio MB, Aguero TH, Tribulo C, Aybar
MJ.
TITLE The gli3 transcriptional activator is a key effector of Indian
hedgehog signaling during Xenopus neural crest development
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 10139)
AUTHORS Vega Lopez GA, Cerrizuela S, Palacio MB, Aguero TH, Tribulo C, Aybar
MJ.
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2017) Developmental Biology, Instituto Superior de
Investigaciones Biologicas (INSIBIO, CONICET-UNT), Chacabuco 461,
Tucuman, Tucuman T4000ILI, Argentina
REFERENCE 3 (bases 1 to 10139)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 10139)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(03-JAN-2017) Developmental Biology, Instituto Superior de
Investigaciones Biologicas (INSIBIO, CONICET-UNT), Chacabuco 461,
Tucuman, Tucuman T4000ILI, Argentina"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT ##Assembly-Data-START##
Assembly Method :: vector nti v. 11
Sequencing Technology :: Applied Biosystems 3130 Genetic Analyzer
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..10139
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS 85..3606
/codon_start=1
/gene="Xlp-Sla-3000"
/product="gli3-Act"
/label=Xlp-Sla-3000
/note="Activator form of GLI3 transcription factor"
/protein_id="ARB02201.1"
/translation="MPGIPSVLNPVQVSIGPSEAAQQNKPTSESAVSSTGDLLHNKRSK
VKPEEDHPSPGAVCIQDQPDGMTLVKEEGVKDESKQEAEVVYETNCHWEGCSREFDTQE
QLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCS
KAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPG
CTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDIHPRPPPPREPGSHSQSRSPGQQTQGI
HGEHKDLSNTTSKHEECLQVRSVKTEKPMSSQPSPGGKSSCSRQQSPISNYTNSGIELN
LNSGGSIGDFSALDETPIMDSTISTATTGLGLHGRRVMTGTKWMEQIKVEKMKQVNGML
PRLNPVPPHRAPTLPPITGNGVQLNSNISLGGLAPVLPNRNDLSSMDITVLNMLNRRDS
NTSTISSAYMSSRRSSGISPCFSSRRSSEASQFEGRVQNLSVAGSYDPISTDASRRSSE
TSQCDGLPTLLSLTPAQQYRLKAKYAAATGGPPPTPLPNMERMSLKTRMALLGDSRDCR
LSPLPSVNVPRRCSDGGVGSYGRRHLLPNELQVNGMRRASDPVKMVSDNVSNTRVVRFN
SLNNVIPPDVPPPMERRNLSLQNYTRNVYSPCPPSISENVALEAMIMEAEGNFDDEDLL
PDDMVQYLNSRNQRLYETIETDALQNNAGERNGNNFEQSHVTSNVINEQFHSSEQTDLI
ENKNDLPIQWNEVSSGSAEYSPSRLKYGQRFPTQQNQPFGLYNNMMVQQQNVPKSGLSQ
QRGYQHHTQNNPQAPQQNLDLYNNSNVWSGQLGRGNQYIDDIERSSLGHSATGSLCNSA
ARGQKLTTNGLPMNTGQQNFGPSTHYSVQSANRAEVVQNENIINQEFMQQMTAEHLIYG
MHLLGVTRSNQTTSGQNGNTTDGTRSFLSTTQNGGEQQPTLAKNFQSFVNSSGNSRQNL
HRNNLPYLQEQIYDTNQHIFKVNSIKMEMQSHPQQHCANAQNFSGQLYDQTATYPQQIM
KSGSEPGMEANCLLQESNNTNSSKLLSPGANHVTSTVDNIDNSLAGVQIAFAAIIDDGD
HASLISGVLSPSIIQNLSRNSSRLTTPRASLTFPAIPVSTSNMAIGDMSSLLTSLAEES
KFLAIMQ"
promoter complement(3614..3631)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
polyA_signal complement(3636..3770)
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
primer_bind complement(4181..4197)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4205..4221
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4229..4259)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(4274..4295)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4583..5171)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5345..6202)
/codon_start=1
/label=AmpR
/note="beta-lactamase"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(6203..6307)
/label=AmpR promoter
primer_bind 6781..6797
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"