LOCUS V045365 7534 bp DNA circular SYN 01-JAN-1980 DEFINITION synthetic circular DNA. ACCESSION V045365 VERSION V045365 KEYWORDS . SOURCE . ORGANISM . . FEATURES Location/Qualifiers enhancer 50..429 /note="human cytomegalovirus immediate early enhancer" /label="CMV enhancer" promoter 430..633 /note="human cytomegalovirus (CMV) immediate early promoter" /label="CMV promoter" CDS 706..2190 /label="NUFIP1(NM_012345)" /note="NUFIP1(NM_012345)" /gene="NUFIP1" CDS 2197..2286 /codon_start=1 /product="3 tandem Myc epitope tags" /transl_table=1 /translation="EQKLISEEDLEQKLISEEDLEQKLISEEDL" /label="3xMyc" misc_feature 2310..2898 /note="woodchuck hepatitis virus posttranscriptional regulatory element" /label="WPRE" polyA_signal 2964..3012 /note="herpes simplex virus thymidine kinase polyadenylation signal (Cole and Stacy, 1985)" /label="HSV TK poly(A) signal" rep_origin 3214..3642 /direction=RIGHT /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" /label="f1 ori" promoter 3656..3985 /note="SV40 enhancer and early promoter" /label="SV40 promoter" CDS 4052..4846 /codon_start=1 /gene="aph(3')-II (or nptII)" /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin®)" /product="aminoglycoside phosphotransferase from Tn5" /transl_table=1 /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF*" /label="NeoR/KanR" polyA_signal 5022..5143 /note="SV40 polyadenylation signal" /label="SV40 poly(A) signal" primer_bind complement(5192..5208) /note="common sequencing primer, one of multiple similar variants" /label="M13 rev" protein_bind 5216..5232 /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-β-D-thiogalactopyranoside (IPTG)." /label="lac operator" promoter complement(5240..5270) /note="promoter for the E. coli lac operon" /label="lac promoter" protein_bind 5285..5306 /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." /label="CAP binding site" rep_origin complement(5594..6182) /direction=LEFT /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" /label="ori" CDS complement(6353..7213) /codon_start=1 /gene="bla" /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /product="β-lactamase" /transl_table=1 /translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA SLIKHW*" /label="AmpR" promoter complement(7214..7318) /gene="bla" /label="AmpR promoter" ORIGIN 1 gttaggcgtt ttgcgctgct tcgcgatgta cgggccagat atacgcgttg acattgatta 61 ttgactagtt attaatagta atcaattacg gggtcattag ttcatagccc atatatggag 121 ttccgcgtta cataacttac ggtaaatggc ccgcctggct gaccgcccaa cgacccccgc 181 ccattgacgt caataatgac gtatgttccc atagtaacgc caatagggac tttccattga 241 cgtcaatggg tggagtattt acggtaaact gcccacttgg cagtacatca agtgtatcat 301 atgccaagta cgccccctat tgacgtcaat gacggtaaat ggcccgcctg gcattatgcc 361 cagtacatga ccttatggga ctttcctact tggcagtaca tctacgtatt agtcatcgct 421 attaccatgg tgatgcggtt ttggcagtac atcaatgggc gtggatagcg gtttgactca 481 cggggatttc caagtctcca ccccattgac gtcaatggga gtttgttttg gcaccaaaat 541 caacgggact ttccaaaatg tcgtaacaac tccgccccat tgacgcaaat gggcggtagg 601 cgtgtacggt gggaggtcta tataagcaga gctctggcta gcgtttaaac ttaagcttgg 661 taccgagctc ggatccacta gtccagtgtg gtggaattcg ccaccatggc tgagccgact 721 agtgatttcg agactcctat cgggtggcat gcgtctcccg agctgactcc cacgttaggg 781 cccctgagcg acactgcccc gccgcgggac agctggatgt tctgggcaat gctgccgcca 841 ccgccaccac cacttacgtc ctcgcttccc gcagccgggt caaagccttc ctctgagtcg 901 cagcccccca tggaggccca gtctctcccc ggggctccgc cccccttcga cgcccagatt 961 cttcccgggg cgcaaccccc cttcgacgcc cagtctcccc ttgattctca gcctcaaccc 1021 agcggccagc cttggaattt ccatgcttcc acatcgtggt attggagaca gtcttctgat 1081 aggtttcctc ggcatcagaa gtccttcaac cctgcagtta aaaattctta ttatccacga 1141 aagtatgatg caaaattcac agacttcagc ttacctccca gtagaaaaca gaaaaaaaag 1201 aaaagaaagg aaccagtttt tcactttttt tgtgatacct gtgatcgtgg ttttaaaaat 1261 caagaaaagt atgacaaaca catgtctgaa catacaaaat gccctgaatt agattgctct 1321 tttactgcac acgagaagat tgtccagttc cattggagaa atatgcatgc tcctggcatg 1381 aagaagatca agttagacac tccagaggaa attgcacggt ggagggaaga aagaaggaaa 1441 aactatccaa ctctggccaa tattgaaagg aagaagaagt taaaacttga aaaggagaag 1501 agaggagcag tattgacaac aacacaatat ggcaagatga aggggatgtc cagacattca 1561 caaatggcaa agatcagaag tcctggcaag aatcacaaat ggaaaaacga caattctaga 1621 cagagagcag tcactggatc aggcagtcac ttgtgtgatt tgaagctaga aggtccaccg 1681 gaggcaaatg cagatcctct tggtgttttg ataaacagtg attctgagtc tgataaggag 1741 gagaaaccac aacattctgt gatacccaag gaagtgacac cagccctatg ctcactaatg 1801 agtagctatg gcagtctttc agggtcagag agtgagccag aagaaactcc catcaagact 1861 gaagcagacg ttttggcaga aaaccaggtt cttgatagca gtgctcctaa gagtccaagt 1921 caagatgtta aagcaactgt tagaaatttt tcagaagcca agagtgagaa ccgaaagaaa 1981 agctttgaaa aaacaaaccc taagaggaaa aaagattatc acaactatca aacgttattc 2041 gaaccaagaa cacaccatcc atatctcttg gaaatgcttc tagctccgga cattcgacat 2101 gaaagaaatg tgattttgca gtgtgttcgg tacatcatca aaaaagactt ttttggactg 2161 gatactaatt ctgcgaaaag taaagatgta ctcgaggaac aaaaactaat atcagaggaa 2221 gatttggaac agaaactaat cagtgaagaa gatttagagc aaaagttaat ttccgaggag 2281 gacttatagt gagggcccga tatctcgaca atcaacctct ggattacaaa atttgtgaaa 2341 gattgactgg tattcttaac tatgttgctc cttttacgct atgtggatac gctgctttaa 2401 tgcctttgta tcatgctatt gcttcccgta tggctttcat tttctcctcc ttgtataaat 2461 cctggttgct gtctctttat gaggagttgt ggcccgttgt caggcaacgt ggcgtggtgt 2521 gcactgtgtt tgctgacgca acccccactg gttggggcat tgccaccacc tgtcagctcc 2581 tttccgggac tttcgctttc cccctcccta ttgccacggc ggaactcatc gccgcctgcc 2641 ttgcccgctg ctggacaggg gctcggctgt tgggcactga caattccgtg gtgttgtcgg 2701 ggaagctgac gtcctttcca tggctgctcg cctgtgttgc cacctggatt ctgcgcggga 2761 cgtccttctg ctacgtccct tcggccctca atccagcgga ccttccttcc cgcggcctgc 2821 tgccggctct gcggcctctt ccgcgtcttc gccttcgccc tcagacgagt cggatctccc 2881 tttgggccgc ctccccgcct ggaaacgggg gaggctaact gaaacacgga aggagacaat 2941 accggaagga acccgcgcta tgacggcaat aaaaagacag aataaaacgc acgggtgttg 3001 ggtcgtttgt tcataaacgc ggggttcggt cccagggctg gcactctgtc gataccccac 3061 cgagacccca ttggggccaa tacgcccgcg tttcttcctt ttccccaccc caccccccaa 3121 gttcgggtga aggcccaggg ctcgcagcca acgtcggggc ggcaggccct gccatagcag 3181 atctgcgcag ctggggctct agggggtatc cccacgcgcc ctgtagcggc gcattaagcg 3241 cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc ctagcgcccg 3301 ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc cgtcaagctc 3361 taaatcgggg catcccttta gggttccgat ttagtgcttt acggcacctc gaccccaaaa 3421 aacttgatta gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg gtttttcgcc 3481 ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact ggaacaacac 3541 tcaaccctat ctcggtctat tcttttgatt tataagggat tttggggatt tcggcctatt 3601 ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttaattctgt ggaatgtgtg 3661 tcagttaggg tgtggaaagt ccccaggctc cccagcaggc agaagtatgc aaagcatgca 3721 tctcaattag tcagcaacca ggtgtggaaa gtccccaggc tccccagcag gcagaagtat 3781 gcaaagcatg catctcaatt agtcagcaac catagtcccg cccctaactc cgcccatccc 3841 gcccctaact ccgcccagtt ccgcccattc tccgccccat ggctgactaa ttttttttat 3901 ttatgcagag gccgaggccg cctctgcctc tgagctattc cagaagtagt gaggaggctt 3961 ttttggaggc ctaggctttt gcaaaaagct cccgggagct tgtatatcca ttttcggatc 4021 tgatcaagag acaggatgag gatcgtttcg catgattgaa caagatggat tgcacgcagg 4081 ttctccggcc gcttgggtgg agaggctatt cggctatgac tgggcacaac agacaatcgg 4141 ctgctctgat gccgccgtgt tccggctgtc agcgcagggg cgcccggttc tttttgtcaa 4201 gaccgacctg tccggtgccc tgaatgaact gcaggacgag gcagcgcggc tatcgtggct 4261 ggccacgacg ggcgttcctt gcgcagctgt gctcgacgtt gtcactgaag cgggaaggga 4321 ctggctgcta ttgggcgaag tgccggggca ggatctcctg tcatctcacc ttgctcctgc 4381 cgagaaagta tccatcatgg ctgatgcaat gcggcggctg catacgcttg atccggctac 4441 ctgcccattc gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc 4501 cggtcttgtc gatcaggatg atctggacga agagcatcag gggctcgcgc cagccgaact 4561 gttcgccagg ctcaaggcgc gcatgcccga cggcgaggat ctcgtcgtga cccatggcga 4621 tgcctgcttg ccgaatatca tggtggaaaa tggccgcttt tctggattca tcgactgtgg 4681 ccggctgggt gtggcggacc gctatcagga catagcgttg gctacccgtg atattgctga 4741 agagcttggc ggcgaatggg ctgaccgctt cctcgtgctt tacggtatcg ccgctcccga 4801 ttcgcagcgc atcgccttct atcgccttct tgacgagttc ttctgagcgg gactctgggg 4861 ttcgcgaaat gaccgaccaa gcgacgccca acctgccatc acgagatttc gattccaccg 4921 ccgccttcta tgaaaggttg ggcttcggaa tcgttttccg ggacgccggc tggatgatcc 4981 tccagcgcgg ggatctcatg ctggagttct tcgcccaccc caacttgttt attgcagctt 5041 ataatggtta caaataaagc aatagcatca caaatttcac aaataaagca tttttttcac 5101 tgcattctag ttgtggtttg tccaaactca tcaatgtatc ttatcatgtc tgtataccgt 5161 cgacctctag ctagagcttg gcgtaatcat ggtcatagct gtttcctgtg tgaaattgtt 5221 atccgctcac aattccacac aacatacgag ccggaagcat aaagtgtaaa gcctggggtg 5281 cctaatgagt gagctaactc acattaattg cgttgcgctc actgcccgct ttccagtcgg 5341 gaaacctgtc gtgccagctg cattaatgaa tcggccaacg cgcggggaga ggcggtttgc 5401 gtattgggcg ctcttccgct tcctcgctca ctgactcgct gcgctcggtc gttcggctgc 5461 ggcgagcggt atcagctcac tcaaaggcgg taatacggtt atccacagaa tcaggggata 5521 acgcaggaaa gaacatgtga gcaaaaggcc agcaaaaggc caggaaccgt aaaaaggccg 5581 cgttgctggc gtttttccat aggctccgcc cccctgacga gcatcacaaa aatcgacgct 5641 caagtcagag gtggcgaaac ccgacaggac tataaagata ccaggcgttt ccccctggaa 5701 gctccctcgt gcgctctcct gttccgaccc tgccgcttac cggatacctg tccgcctttc 5761 tcccttcggg aagcgtggcg ctttctcaat gctcacgctg taggtatctc agttcggtgt 5821 aggtcgttcg ctccaagctg ggctgtgtgc acgaaccccc cgttcagccc gaccgctgcg 5881 ccttatccgg taactatcgt cttgagtcca acccggtaag acacgactta tcgccactgg 5941 cagcagccac tggtaacagg attagcagag cgaggtatgt aggcggtgct acagagttct 6001 tgaagtggtg gcctaactac ggctacacta gaaggacagt atttggtatc tgcgctctgc 6061 tgaagccagt taccttcgga aaaagagttg gtagctcttg atccggcaaa caaaccaccg 6121 ctggtagcgg tggttttttt gtttgcaagc agcagattac gcgcagaaaa aaaggatctc 6181 aagaagatcc tttgatcttt tctacggggt ctgacgctca gtggaacgaa aactcacgtt 6241 aagggatttt ggtcatgaga ttatcaaaaa ggatcttcac ctagatcctt ttaaattaaa 6301 aatgaagttt taaatcaatc taaagtatat atgagtaaac ttggtctgac agttaccaat 6361 gcttaatcag tgaggcacct atctcagcga tctgtctatt tcgttcatcc atagttgcct 6421 gactccccgt cgtgtagata actacgatac gggagggctt accatctggc cccagtgctg 6481 caatgatacc gcgagaccca cgctcaccgg ctccagattt atcagcaata aaccagccag 6541 ccggaagggc cgagcgcaga agtggtcctg caactttatc cgcctccatc cagtctatta 6601 attgttgccg ggaagctaga gtaagtagtt cgccagttaa tagtttgcgc aacgttgttg 6661 ccattgctac aggcatcgtg gtgtcacgct cgtcgtttgg tatggcttca ttcagctccg 6721 gttcccaacg atcaaggcga gttacatgat cccccatgtt gtgcaaaaaa gcggttagct 6781 ccttcggtcc tccgatcgtt gtcagaagta agttggccgc agtgttatca ctcatggtta 6841 tggcagcact gcataattct cttactgtca tgccatccgt aagatgcttt tctgtgactg 6901 gtgagtactc aaccaagtca ttctgagaat agtgtatgcg gcgaccgagt tgctcttgcc 6961 cggcgtcaat acgggataat accgcgccac atagcagaac tttaaaagtg ctcatcattg 7021 gaaaacgttc ttcggggcga aaactctcaa ggatcttacc gctgttgaga tccagttcga 7081 tgtaacccac tcgtgcaccc aactgatctt cagcatcttt tactttcacc agcgtttctg 7141 ggtgagcaaa aacaggaagg caaaatgccg caaaaaaggg aataagggcg acacggaaat 7201 gttgaatact catactcttc ctttttcaat attattgaag catttatcag ggttattgtc 7261 tcatgagcgg atacatattt gaatgtattt agaaaaataa acaaataggg gttccgcgca 7321 catttccccg aaaagtgcca cctgacgtcg acggatcggg agatctcccg atcccctatg 7381 gtcgactctc agtacaatct gctctgatgc cgcatagtta agccagtatc tgctccctgc 7441 ttgtgtgttg gaggtcgctg agtagtgcgc gagcaaaatt taagctacaa caaggcaagg 7501 cttgaccgac aattgcatga agaatctgct tagg //