载体基本信息 | |||
载体名称 | lenti sgRNA(MS2)_zeo backbone | 载体抗性 | Ampicillin |
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载体长度 | 9996 bp | 载体类型 | CRISPR Plasmids |
载体来源 | Konermann S, Brigham MD, Trevino AE, Joung J, Abudayyeh OO, Barcena | 拷贝数 | High copy number |
lenti sgRNA(MS2)_zeo backbone 载体载体图谱
lenti sgRNA(MS2)_zeo backbone 载体载体序列
LOCUS lenti_sgRNA(MS2) 9996 bp DNA circular SYN 01-JAN-1980 DEFINITION Zhang lab lentiviral vector for expressing a Zeocin(TM)-resistance marker plus a single guide RNA (sgRNA) containing two MS2 stem loops. ACCESSION . VERSION . KEYWORDS lenti sgRNA(MS2)_zeo backbone. SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 9996) AUTHORS Konermann S, Brigham MD, Trevino AE, Joung J, Abudayyeh OO, Barcena C, Hsu PD, Habib N, Gootenberg JS, Nishimasu H, Nureki O, Zhang F. TITLE Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex. JOURNAL Nature 2015;517:583-8. PUBMED 25494202 REFERENCE 2 (bases 1 to 9996) AUTHORS Zhang Lab / Addgene #61427 TITLE Direct Submission REFERENCE 3 (bases 1 to 9996) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Nature"; date: "2015"; volume: "517"; pages: "583-8" COMMENT SGRef: number: 2; type: "Journal Article" FEATURES Location/Qualifiers source 1..9996 /mol_type="other DNA" /organism="synthetic DNA construct" enhancer 238..617 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 618..820 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" LTR 835..1015 /label=5' LTR (truncated) /note="truncated 5' long terminal repeat (LTR) from HIV-1" misc_feature 1062..1187 /label=HIV-1 Psi /note="packaging signal of human immunodeficiency virus type 1" misc_feature 1680..1913 /label=RRE /note="The Rev response element (RRE) of HIV-1 allows for Rev-dependent mRNA export from the nucleus to the cytoplasm." CDS 2098..2142 /label=gp41 peptide /note="antigenic peptide corresponding to amino acids 655 to 669 of the HIV envelope protein gp41 (Lutje Hulsik et al., 2013)" CDS 2291..2332 /note="Protein Tat from Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22). Accession#: P12509" misc_feature 2440..2557 /label=cPPT/CTS /note="central polypurine tract and central termination sequence of HIV-1" promoter 2607..2847 /label=U6 promoter /note="RNA polymerase III promoter for human U6 snRNA" misc_RNA 2893..2911 /label=MS2 stem loop /note="stem loop that binds the bacteriophage MS2 coat protein" misc_RNA 2963..2981 /label=MS2 stem loop /note="MS2 stem loop" /note="stem loop that binds the bacteriophage MS2 coat protein" terminator 3012..3017 /note="polIII terminator" /note="RNA polymerase III transcription terminator" promoter 3105..4282 /label=EF-1-alpha promoter /note="strong constitutive promoter for human elongation factor EF-1-alpha" CDS 4289..4660 /label=BleoR /note="antibiotic-binding protein" misc_feature 4688..5276 /label=WPRE /note="woodchuck hepatitis virus posttranscriptional regulatory element" LTR 5801..5981 /label=5' LTR (truncated) /note="5' LTR (truncated)" /note="truncated 5' long terminal repeat (LTR) from HIV-1" polyA_signal 6013..6237 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" rep_origin 6283..6711 /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 6725..7054 /label=SV40 promoter /note="SV40 enhancer and early promoter" promoter 7102..7149 /label=EM7 promoter /note="synthetic bacterial promoter" CDS 7168..7539 /label=BleoR /note="antibiotic-binding protein" polyA_signal 7672..7805 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" promoter complement(7890..7920) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind complement(7935..7956) /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." rep_origin complement(8244..8832) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" CDS complement(9006..9863) /label=AmpR /note="beta-lactamase" promoter complement(9864..9968) /label=AmpR promoter
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